plantMASST - Community-driven chemotaxonomic digitization of plants

作者：Paulo Wender Portal Gomes, Helena Mannochio-Russo, Robin Schmid, Simone Zuffa, Tito Damiani, Luis-Manuel Quirós-Guerrero, Andrés Mauricio Caraballo‐Rodríguez, Haoqi Nina Zhao, Heejung Yang, Shipei Xing, Vincent Charron‐Lamoureux, Desnor N. Chigumba, Brian E. Sedio, Jonathan A. Myers, Pierre‐Marie Allard, Thomas V. Harwood, Giselle Tamayo‐Castillo, Kyo Bin Kang, Emmanuel Défossez, Héctor H. F. Koolen, Milton Silva, Consuelo Yumiko Yoshioka e Silva, Sergio Rasmann, Tom W. N. Walker, Gaétan Glauser, José Miguel Chaves‐Fallas, Bruno David, Hyun Woo Kim, K. Lee, Myeong Ji Kim, Won Jun Choi, Young‐Sam Keum, Emilly J. S. P. de Lima, Lívia Soman de Medeiros, Giovana A. Bataglion, Emmanoel Vilaça Costa, Felipe M. A. da Silva, Alice Rhelly Veloso Carvalho, José Diogo Evangelista Reis, Sônia Pamplona, Eunah Jeong, Kyungha Lee, Geum Jin Kim, Yun‐Seo Kil, Joo‐Won Nam, Hyukjae Choi, Yoo Kyong Han, Si Young Park, Ki Yong Lee, Changling Hu, Yilun Dong, Shengmin Sang, Colin R. Morrison, Ricardo M. Borges, Andrew Magno Teixeira, Seo Yoon Lee, Bum Soo Lee, Se Yun Jeong, Ki Hyun Kim, Adriano Rutz, Arnaud Gaudry, Edouard Brüelhart, Iris F. Kappers, Rumyana Karlova, Mara Meisenburg, Roland Berdaguer, J. Sebastián Tello, D. Henderson, Leslie Cayola, S. Joseph Wright‬, David Allen, Kristina J. Anderson‐Teixeira, Jennifer L. Baltzer, James A. Lutz, Sean M. McMahon, Geoffrey G. Parker, John D. Parker, Trent R. Northen, Benjamin P. Bowen, Tomáš Pluskal, Justin J. J. van der Hooft, Jeremy Carver, Nuno Bandeira, Benjamin Pullman, Jean‐Luc Wolfender, Roland D. Kersten, Mingxun Wang, Pieter C. Dorrestein · 发表于：bioRxiv (Cold Spring Harbor Laboratory) · 年份：2024 · DOI：10.1101/2024.05.13.593988 · 被引用次数：27 · 研究领域：Genetics, Bioinformatics, and Biomedical Research、Cell Image Analysis Techniques、Gene expression and cancer classification

Understanding the distribution of hundreds of thousands of plant metabolites across the plant kingdom presents a challenge. To address this, we curated publicly available LC-MS/MS data from 19,075 plant extracts and developed the plantMASST reference database encompassing 246 botanical families, 1,469 genera, and 2,793 species. This taxonomically focused database facilitates the exploration of plant-derived molecules using tandem mass spectrometry (MS/MS) spectra. This tool will aid in drug discovery, biosynthesis, (chemo)taxonomy, and the evolutionary ecology of herbivore interactions.