Supporting data for "A single-cell transcriptomic atlas tracking the neural basis of division of labor in an ant superorganism".

作者：Qiye Li, Mingyue Wang, Pei Zhang, Yang Liu, Qunfei Guo, Yuanzhen Zhu, Tinggang Wen, Xueqin Dai, Xiafang Zhang, Manuel Nagel, Bjarke Hamberg Dethlefsen, Nianxia Xie, Jie Zhao, Wei Jiang, Lei Han, Liang Wu, Wenjiang Zhong, Zhifeng Wang, Xiaoyu Wei, Wei Dai, longqi liu, Xun Xu, Haorong Lu, Huanming Yang, Jian Wang, Jacobus J. Boomsma, Chuanyu Liu, Guojie Zhang, Weiwei Liu · 发表于：Figshare · 年份：2023 · DOI：10.6084/m9.figshare.16616353 · 被引用次数：2 · 研究领域：Insect and Arachnid Ecology and Behavior

Files provided in this dataset: 1. M.Pharaonis.genome.fasta.gz : genome assembly of the pharaoh ant in fasta format.2. M.pharaonis.genome.gtf.gz : gene annotations of the pharaoh ant genome in gene transfer format (GTF).3. M.pharaonis.cds.fasta.gz : coding sequences of genes of the pharaoh ant in fasta format.4. M.pharaonis.pep.fasta.gz : peptide sequences of genes of the pharaoh ant in fasta format.5. M.pharaonis.gene.function.annotation.gz : functional annotations of all protein-coding genes of the pharaoh ant.6. Mpha.umi.geneMatrix.gz : the digital gene expression matrix (the number of UMIs per gene per nucleus) of the pharaoh ant.7. Mpha.rds : analysis results of the 206,367 pharaoh ant single-nucleus transcriptomes generated by Seurat.8. M.pharaonis.marker.genes.gz : marker genes for the 43 cell clusters identified in the pharaoh ant brains.9. NCBI_CNSA_correspond_list : correspondence across NCBI accession, CNSA accession, library, biological replicate, adult phenotype, read1 length, cell barcode1 position, cell barcode2 position, and UMI position for the raw sequencing data.10. Amel.rds : analysis results of the honeybee single-cell transcriptome data (PMID: 32080242) generated by Seurat.11. Dmelmb.rds : analysis results of the fly midbrain single-cell transcriptome data (PMID: 29671739) generated by Seurat.12. Dmelmb.glia.recluster.rds : analysis results of re-clustering the glial cells from Dmelmb.rds (PMID: 29671739) generated by Seurat.13. s...