Suhuai suckling piglet hindgut microbiome-metabolome responses to different dietary copper levels

作者：Feng Zhang, Weijiang Zheng, Yongqiang Xue, Wen Yao · 发表于：Applied Microbiology and Biotechnology · 年份：2018 · DOI：10.1007/s00253-018-9533-0 · 被引用次数：60 · 研究领域：Gut microbiota and health、Ginger and Zingiberaceae research、Clostridium difficile and Clostridium perfringens research

Abstract Unabsorbed copper accumulates in the hindgut of pigs that consume high levels of dietary copper, which enhances the coselection of antibiotic-resistant bacteria and is considered detrimental to the environment and to porcine health. In our study, a combination of 16S rRNA pyrosequencing and nontargeted metabolomics was used to investigate the microbiome-metabolome responses to dietary copper levels in the hindgut of suckling piglets. The results showed that the dietary copper level affected the abundance of several Clostridia genera and that the relative abundance of butyrate-producing bacteria, such as Coprococcus , Roseburia , and Acidaminococcus , was reduced in the 300 mg kg −1 (high) Cu group. Metabolomic analysis revealed that dietary copper levels affected protein and carbohydrate metabolites, protein biosynthesis, the urea cycle, galactose metabolism, gluconeogenesis, and amino acid metabolism (including the metabolism of arginine, proline, β-alanine, phenylalanine, tyrosine, and methionine). Furthermore, Pearson’s correlation analysis showed that the abundance levels of Coprococcus (family Lachnospiraceae ) and operational taxonomic unit (OTU) 18 (family Ruminococcaceae ) were positively correlated with energy metabolism pathways (gluconeogenesis, glycolysis, and the pentose phosphate pathway). The abundance of Streptococcus was negatively correlated with amino acid metabolism pathways (protein biosynthesis, glycine, serine, threonine, methionine, phenylalan...