Daniel Bergman

机构：University of Maryland, Baltimore, University of Michigan, Foundation for the National Institutes of Health, National Cancer Institute · ORCID：0000-0002-2166-6616

发表论文 61 篇 · 总被引 291 次 · h-index 11

代表论文

• Advances in surrogate modeling for biological agent-based simulations: trends, challenges, and future prospects (2025 · Journal of Mathematical Biology · 被引 14)
• UQ-PhysiCell: An extensible Python framework for uncertainty quantification and model analysis in PhysiCell (2026 · bioRxiv (Cold Spring Harbor Laboratory) · 被引 1)
• Tumor-immune trajectory context connects static tissue architecture to clinical outcomes (2026 · bioRxiv (Cold Spring Harbor Laboratory) · 被引 1)
• BIWT: a bioinformatics walkthrough for embedding spatial multiomics in agent-based models for virtual cells (2025 · Bioinformatics · 被引 1)
• PhysiCellModelManager.jl: A database-backed manager of PhysiCell simulation campaign inputs and outputs. (2026 · Zenodo (CERN European Organization for Nuclear Research))
• Protocol for generation, time-course imaging, and automated quality control of 3D spheroid invasion using TRACEQC (2026 · STAR Protocols)