José M. Fernández

机构：Barcelona Supercomputing Center · ORCID：0000-0002-4806-5140

发表论文 176 篇 · 总被引 4980 次 · h-index 29

代表论文

• Systematic assessment of long-read RNA-seq methods for transcript identification and quantification (2024 · Nature Methods · 被引 233)
• The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics (2024 · npj Biodiversity · 被引 55)
• WorkflowHub: a registry for computational workflows (2025 · Scientific Data · 被引 44)
• Recording provenance of workflow runs with RO-Crate (2024 · PLoS ONE · 被引 42)
• FANTASIA leverages language models to decode the functional dark proteome across the animal tree of life (2025 · Communications Biology · 被引 17)
• Extensible benchmarking of methods that identify and quantify polyadenylation sites from RNA-seq data (2023 · RNA · 被引 17)